Locus SCA17 TBP
Suggest EditDisease
NameSpinocerebellar ataxia type 17
Inheritance
DescriptionA rare subtype of type I autosomal dominant cerebellar ataxia (ADCA type I). It is characterized by a variable clinical picture which can include dementia, psychiatric disorders, parkinsonism, dystonia, chorea, spasticity, and epilepsy1 .
Prevalence
0.2100,000
HPO Terms
HP:0000020 Urinary incontinenceHP:0000473 TorticollisHP:0000640 Gaze-evoked nystagmusHP:0000643 BlepharospasmHP:0000708 Atypical behaviorHP:0000716 DepressionHP:0000718 Aggressive behaviorHP:0000726 DementiaHP:0000727 Frontal lobe dementiaHP:0000738 HallucinationsHP:0000743 Frontal release signsHP:0000757 Lack of insightHP:0001250 SeizureHP:0001251 AtaxiaHP:0001257 SpasticityHP:0001260 DysarthriaHP:0001268 Mental deteriorationHP:0001272 Cerebellar atrophyHP:0001288 Gait disturbanceHP:0001289 ConfusionHP:0001300 ParkinsonismHP:0001310 DysmetriaHP:0001332 DystoniaHP:0001336 MyoclonusHP:0002015 DysphagiaHP:0002063 RigidityHP:0002066 Gait ataxiaHP:0002067 BradykinesiaHP:0002070 Limb ataxiaHP:0002072 ChoreaHP:0002080 Intention tremorHP:0002136 Broad-based gaitHP:0002171 GliosisHP:0002186 ApraxiaHP:0002300 MutismHP:0002356 Writer's crampHP:0002403 Positive Romberg signHP:0002506 Diffuse cerebral atrophyHP:0002529 Neuronal loss in central nervous systemHP:0004305 Involuntary movementsHP:0007058 Generalized cerebral atrophy/hypoplasiaHP:0007256 Abnormal pyramidal signHP:0007366 Atrophy/Degeneration affecting the brainstemHP:0007668 Impaired pursuit initiation and maintenanceHP:0011999 ParanoiaHP:0012082 Cerebellar Purkinje layer atrophy
Association
Mendelian
Locus
DetailsBenign range is 25-40 repeats, pathogenic range is 49+ repeats (largest to date 66 motifs, with mild correlation between size and age of onset), and intermediate alleles (41-48 repeats) are associated with reduced penetrance and potentially milder phenotypes2 . Huntington's disease-like phenotype6 . CAA CAG CAA interruption is seen in all alleles stably transmitted across generations2,7 .
MechanismPolyglutamine expansion leading to transcriptional dysregulation8 .
LoF/GoF
Detection
Year
Year first published
199910
Location in Gene
Coding Exon 3
Gene Strand
Alleles
Ref. Motif Reference motif, reference orientation
CAG
Ranges
Benign (ref.) Benign motif, reference orientation
–
Benign (gene) Benign motif, gene orientation
–
Pathogenic (ref.) Pathogenic motif, reference orientation
CAG
Pathogen. (gene) Pathogenic motif, gene orientation
CAG
Unknown (ref.) Unknown motif, reference orientation
–
Unknown (gene) Unknown motif, gene orientation
–
Interruption (ref.) Interruption motif, reference orientation
CAA
Interrup. (gene) Interruption motif, gene orientation
CAA
gnomAD
Pathogenic genotype frequency data is not displayed for this locus because a substantial number of large alleles failed manual review by the gnomAD team.
References
Direct supporting references for info on this page.
1
Ontology Lookup Service (OLS)
mondo:00117812
Spinocerebellar Ataxia Type 17
Yasuko,Toyoshima, Osamu,Onodera, Mitsunori,Yamada, Shoji,Tsuji, Hitoshi,Takahashi
GeneReviews® · 1993-01-01
genereviews:NBK14383
Profiling of Short-Tandem-Repeat Disease Alleles in 12,632 Human Whole Genomes.
Haibao,Tang, Ewen F,Kirkness, Christoph,Lippert, William H,Biggs, Martin,Fabani, Ernesto,Guzman, Smriti,Ramakrishnan, Victor,Lavrenko, Boyko,Kakaradov, Claire,Hou, Barry,Hicks, David,Heckerman, Franz J,Och, C Thomas,Caskey, J Craig,Venter, Amalio,Telenti
American journal of human genetics · 2017-11-02
pmid:291000844
Spinocerebellar ataxia 17 (SCA17) and Huntington's disease-like 4 (HDL4).
Giovanni,Stevanin, Alexis,Brice
Cerebellum (London, England) · 2008-01-01
pmid:184186876
Huntington's disease-like phenotype due to trinucleotide repeat expansions in the TBP and JPH3 genes.
Giovanni,Stevanin, Hiroto,Fujigasaki, Anne-Sophie,Lebre, Agnes,Camuzat, Cecile,Jeannequin, Catherine,Dode, Junko,Takahashi, Chankranira,San, Robert,Bellance, Alexis,Brice, Alexandra,Durr
Brain : a journal of neurology · 2003-05-06
pmid:128051147
Comprehensive genetic diagnosis of tandem repeat expansion disorders with programmable targeted nanopore sequencing.
Igor,Stevanovski, Sanjog R,Chintalaphani, Hasindu,Gamaarachchi, James M,Ferguson, Sandy S,Pineda, Carolin K,Scriba, Michel,Tchan, Victor,Fung, Karl,Ng, Andrea,Cortese, Henry,Houlden, Carol,Dobson-Stone, Lauren,Fitzpatrick, Glenda,Halliday, Gianina,Ravenscroft, Mark R,Davis, Nigel G,Laing, Avi,Fellner, Marina,Kennerson, Kishore R,Kumar, Ira W,Deveson
Science advances · 2022-03-04
pmid:352451108
Molecular Mechanisms in Pentanucleotide Repeat Diseases.
Joana R,Loureiro, Ana F,Castro, Ana S,Figueiredo, Isabel,Silveira
Cells · 2022-01-08
pmid:350533219
The Frequency of Intermediate Alleles in Patients with Cerebellar Phenotypes.
Elena,Capacci, Silvia,Bagnoli, Giulia,Giacomucci, Costanza Maria,Rapillo, Alessandra,Govoni, Valentina,Bessi, Cristina,Polito, Irene,Giotti, Alice,Brogi, Elisabetta,Pelo, Sandro,Sorbi, Benedetta,Nacmias, Camilla,Ferrari
Cerebellum (London, England) · 2023-10-31
pmid:3790640710
A neurological disease caused by an expanded CAG trinucleotide repeat in the TATA-binding protein gene: a new polyglutamine disease?
R,Koide, S,Kobayashi, T,Shimohata, T,Ikeuchi, M,Maruyama, M,Saito, M,Yamada, H,Takahashi, S,Tsuji
Human molecular genetics · 1999-10-01
pmid:10484774Additional Literature
Additional literature related to this locus.
Raw PubMed search results
(All PubMed results returned by searching for this gene, tandem repeats, and disease, in medline format)
Characteristics of a Cohort of Individuals With SCA27B Associated With Repeat Expansions in
Sarah C,Anderson, Shilpan G,Patel, Miriam,Rodrigues, Marco,Mancuso-Marcello, Mark,Simpson
Neurology. Genetics · 2026-09-01
pmid:42699715Diagnostic redirection in dementia-first spinocerebellar ataxia type 17: a family-based case report and focused literature review.
Siqi,Zhang, Xie,Zhang, Lijuan,Li, Bingling,Zhou, Wei,Shao
Frontiers in neuroscience · 2026-07-13
pmid:42516548Computational Short Tandem Repeat Genotyping Reveals Clinically Relevant Expansions in a Large Turkish Neurodegeneration Disease Cohort.
Zakhiriddin,Khojakulov, Robin J,Palvadeau, Müge,Kovancılar-Koç, Irmak,Atay, Irmak,Şahbaz, Şeyma,Tekgül, Ayça,Şahin, Esmer Zeynep Duru,Badakal, Tuğçe,Gül-Demirkale, Vildan,Çiftçi, Elif,Bayraktar, Ceren,Tunca, Natalia,Smolina, Fulya,Akçimen, Ayşe Nazlı,Başak
International journal of molecular sciences · 2026-05-13
pmid:42196324Detection of short tandem repeat expansions on a targeted neurological gene panel using STRipy improves the diagnostic rate for ataxias.
Carolin K,Scriba, Chiara,Folland, Michael,Black, Jessica,Baker, Daniel,Abromeit, Samantha,Saw, Mei-Ting,Chiew, Rebecca,Gooding, Nigel G,Laing, Mark R,Davis, Gianina,Ravenscroft
Brain communications · 2026-03-16
pmid:42038259Childhood-Onset Huntington's Disease-Like Presentation of SCA17 with Intermediate Repeats, A Case Report.
Meaghan,Berns, Kelsey,Jensen, Laura,Speltz, Leonardo Brito,Almeida
Cerebellum (London, England) · 2026-03-17
pmid:41843312Short tandem repeat expansions in patients with neurodegenerative dementia.
Yuan,Zhu, Xuewen,Xiao, Yiliang,Liu, Zheng,Wang, Tengfei,Luo, Tianyan,Xu, Qijie,Yang, Xiaoli,Hao, Cong,Zhang, Sizhe,Zhang, Shilin,Luo, Yafang,Zhou, Xinxin,Liao, Yun,Tian, Ling,Weng, Liangjuan,Fang, Beisha,Tang, Bin,Jiao, Jinchen,Li, Lu,Shen
EBioMedicine · 2026-02-26
pmid:41762523Repeat Variants, Biomarkers, and Molecular Signatures in Parkinson's Disease:
Jose Miguel,Laffita-Mesa, Martin,Paucar, Per,Svenningsson
International journal of molecular sciences · 2025-09-20
pmid:41009775Diagnostic yield and limitations of whole-genome sequencing for hereditary cerebellar ataxia.
Wai Yan,Yau, Roisin,Sullivan, Emer,O'Connor, David,Pellerin, Michael H,Parkinson, Paola,Giunti, Marie-Josée,Dicaire, Matt C,Danzi, Stephan,Züchner, Bernard,Brais, Nicholas W,Wood, Henry,Houlden, Jana,Vandrovcova
Brain communications · 2025-05-17
pmid:40488180Isolated Generalized Chorea in a Patient with Small-Expanded Allele Spinocerebellar Ataxia 17.
Giulia,Paparella, Martina,De Riggi, Simone,Aloisio, Adriana,Martini, Luca,Angelini, Daniele,Birreci, Davide,Costa, Antonio,Cannavacciuolo, Anna Maria,Griguoli, Stefano,Gambardella, Matteo,Bologna
Cerebellum (London, England) · 2025-06-06
pmid:40478462